SUPERFAMILY 1.73 HMM library and genome assignments server

Domain assignment for gi|16129306|ref|NP_415861.1| from Escherichia coli K-12 subMG1655

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|16129306|ref|NP_415861.1|
Domain Number 1 Region: 198-288,315-407
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 1.46e-31
Family Lambda integrase-like, catalytic core 0.0058
Further Details:      
 

Protein sequence

External link(s) gi|16129306|ref|NP_415861.1|
Sequence length 411
Comment Rac prophage; integrase [Escherichia coli str. K-12 substr. MG1655]
Sequence
MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE
YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES
TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF
ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW
EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT
FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT
FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
Download sequence
Identical sequences B1XCH4 B6IA62 P76056
gi|89108193|ref|AP_001973.1| gi|209918590|ref|YP_002292674.1| gi|238900580|ref|YP_002926376.1| gi|170081024|ref|YP_001730344.1|

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